Table 3. Relative binding free energies (kcal/mol) between wild and mutant ETA/BMS-248360 and AT1R/BMS-248360 complex.
ETA/BMS-248360 complex | |||||||
---|---|---|---|---|---|---|---|
ΔGBinda | ΔGBind Coulombb | ΔGBind Covalentc | ΔGBind Hbondd | ΔGBind Lipoe | ΔGBind SolvGBf | ΔGBindvdWg | |
WT | −120.21 | 10.18 | 4.34 | −0.97 | −71.07 | 5.77 | −66.08 |
N137A | −104.95 | −2.20 | 14.72 | −1.02 | −66.10 | 23.18 | −71.08 |
Q165A | −99.20 | 17.50 | 13.54 | −0.64 | −63.25 | 2.01 | −66.18 |
AT1R/BMS-248360 complex | |||||||
WT | −121.44 | 32.18 | 14.14 | −1.19 | −63.37 | −16.00 | −80.91 |
Y113A | −113.42 | 35.53 | 13.89 | −0.78 | −65.84 | −17.76 | −75.69 |
Q257A | −115.70 | 37.07 | 13.82 | −0.85 | −66.60 | −18.05 | −79.54 |
N294A | −120.89 | 28.40 | 13.77 | −1.17 | −67.39 | −14.14 | −78.04 |
WT, Wild Type.
aMMGBSA free energy of binding
bContribution to the MMGBSA free energy of binding from the Coulomb energy
cContribution to the MMGBSA free energy of binding from covalent binding
dContribution to the MMGBSA free energy of binding from hydrogen bonding
eContribution to the MMGBSA free energy of binding from lipophillic binding
fContribution to the MMGBSA free energy of binding from the van der Waals energy
eContribution to the MMGBSA free energy of binding from the generalized Born electrostatic solvation energy.