Table 3.
OM lipoproteins whose abundance is significantly changed by at least 2 fold in surA strains
| Proteins ≥ 2 fold more abundant in in surA strains (P<0.05) | ||
|---|---|---|
| Protein | Ratio1 | Effect of σE induction on mRNA level |
| BamC | 5.0 | ↑ |
| NlpD | 3.8 | |
| RlpA | 4.7 | |
| YbhC | 3.1 | |
| YbjP | 3.7 | |
| YedD | 3.4 | |
| BamB | 4.3 | ↑ |
| BamD | 2.7 | ↑ |
| YggN | Not detected in WT | ↑ |
| YiaD | 2.1 | |
| YraM | 2.3 | |
| CutF | 2.0 | |
| BamE | 2.5 | ↑ |
| Pal | 2.7 | |
Only the proteins whose corresponding genes are induced (↑) or repressed (↓) upon σE activation are shown in grey [21] [36].
1
. ratios were calculated by considering that wild-type SC values=1.
A complete list of all the identified lipoproteins with the respective SC values is available in Supplementary table 1.