. 2013 Jun 11;8(8):e25059. doi: 10.4161/psb.25059

Table 4. Regulation of Ustilago maydis genes described as important for virulence in maize, during Arabidopsis infection.

Identity		Description	Reference	Fold change during Arabidopsis thaliana infection
				Days post-infection with the haploid strain FB2				Days post-infection with the diploid strain Uid1
				1	2	4	8	1	2	4	8
um00641	um11450	Hgl1; Hgl1p, required for dimorphism and teliospore formation	Deletion⁶⁷	4.4 down	5.2 down	-	-	3.0 down	3.9 down	3.1 down	-
um01374		Pit1	Deletion²¹	-	2.2 up	3.9 up	3.1 up	-	-	2.2 up	2.2 up
um01597		Hap2	Deletion⁶⁸	5.2 down	2.8 down	2.6 down	-	2.9 down	2.2 down	-	-
um01947		Related to cytochrome-c peroxidase precursor	Deletion⁶⁹	2.6 down	16.5 down	14.8 down	48.2 down	-	-	3.0 down	3.6 down
um02374		Srt1; related to monosaccharide transporter	Deletion⁷⁰	3.1 down	2.7 down	3.2 down	-	3.9 down	3.5 down	-	-
um02377		Probable cytochrome c peroxidase precursor	Deletion⁶⁹	-	-	-	-	3.7 up	3.3 up	2.2 up	2.9 up
um03280	um10828	Tup1; probable TUP1-general transcription repressor	Deletion²⁸	-	-	-	-	2.2 down	-	-	-
um03305		Ubc3; MAP kinase	Deletion⁷¹	3.5 up	3.1 up	3.6 up	3.4 up	2.3 up	2.3 up	-	-
um03315		Ukb1; serine/threonine protein kinase b-related Ukb1	Deletion⁷²	3.1 up	2.4 up	2.8 up	2.3 up	-	-	-	-
um04258.2	um04258	Ubc4 - MAPKK kinase	Deletion⁷³	-	2.0 down	-	-	-	-	-	-
um04474		Gpa3; guanine nucleotide-binding protein α-3 subunit	Deletion⁷⁴	2.3 up	2.8 up	2.8 up	4.3 up	3.2 up	3.3 up	3.9 up	3.8 up
um04580		O-mannosylation	Deletion⁷⁵	3.3 up	-	2.3 up	2.0 up	2.5 up	2.0 up	-	2.0 up
um05261		Ubc2; MAP kinase pathway-interacting protein	Deletion⁷⁶	2.9 down	2.7 down	2.8 down	2.0 down	4.2 down	4.2 down	3.6 down	2.5 down
um05433		Pmt4; probable PMT4; dolichyl-phosphate-mannose–protein O-mannosyltransferase	Deletion⁴⁴	3.3 up	2.8 up	3.1 up	2.6 up	-	-	-	-
um05818		Probable chimeric spermidine synthase/saccharopine reductase	Deletion⁷⁷	-	-	2.4 up	2.7 up	2.0 down	-	-	2.0 down
um05850	um05850.2	Polyamine oxidase (PAO)	Deletion⁷⁸	3.5 up	2.4 up	2.4 up	2.2 up	2.3 up	-	2.2 up	2.0 up
um10417	um04252	Nit2; related to transcription factor ScGATA-6	Deletion²⁹	-	-	-	-	2.7 down	2.7 down	2.2 down	-
um10672	um10672.2	Peroxidases	Deletion⁶⁹	2.7 down	-	2.3 down	2.3 down	4.5 down	5.2 down	4.1 down	5.7 down
um10792	um00999	Related to S-adenosylmethionine decarboxylase (spe-2)	Deletion⁷⁹	3.0 down	2.0 down	2.1 down	-	-	-	-	-
um10803	um01516	Sql2; guanyl nucleotide exchange factor Sql2	Deletion⁸⁰	2.7 down	2.6 down	2.5 down	2.2 down	2.1 down	2.5 down	-	-
um11410	um02513	Crk1; Cdk-related kinase 1	Deletion⁸¹	-	2.1 up	2.1 up	2.5 up	-	-	-	2.3 up
um11453	um00648	Ubc5; probable UBC5 - E2 ubiquitin-conjugating enzyme	Deletion⁷³	-	-	-	-	2.5 up	3.1 up	-	-
um12033	um06025	Rop1 HMG-box transcription factor (C-terminal fragment)	Deletion⁸²	-	-	3.1 up	-	-	-	-	-
um04456	um10537	Adr1 - protein kinase A, catalytic subunit	Described⁸³	3.3 up	3.2 up	2.9 up	2.5 up	-	-	-	-
um12024	um05762	hdp1	Described¹⁶	-	-	5.6 up	2.0 up	-	-	-	-