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. Author manuscript; available in PMC: 2014 Dec 1.
Published in final edited form as: Genet Epidemiol. 2013 Oct 25;37(8):778–786. doi: 10.1002/gepi.21763

Table 1.

Top genes identified using the data from the Cleveland Family Study using the proposed GEE-KM method and the minimum p-value GEE method.

GENE Chr. No. GEE-SKAT MinP-GEE
1 AP4S1 14 0.000129 0.0112
2 TMEM98 17 0.000271 0.002938
3 RNF144A 2 0.000285 0.008314
4 IFITM3 11 0.000287 0.0009285
5 HNRNPA1L2 16 0.000378 0.004832
6 MARCH5 10 0.000382 0.003501
7 LAPTM5 1 0.000383 0.007125
8 ACAA2 18 0.000465 0.003828
9 CAPN10 2 0.000501 5.74E-06
10 AK5 1 0.000555 0.004784
11 C19orf45 19 0.000568 0.001163
12 C5orf45 5 0.000582 0.0003733
13 LOC338588 10 0.000685 0.01406
14 MED29 19 0.000776 7.94E-05
15 GORAB 1 0.000862 0.01256
16 B4GALT1 9 0.000884 0.0006125
17 ANGPT4 20 0.001075 0.001693
18 SLC37A4 11 0.001137 0.000565
19 TTC30A 2 0.001259 0.01363
20 FBLIM1 1 0.001315 0.001056
21 LY6K 8 0.00135 0.001523
22 MBOAT1 6 0.001407 0.01596
23 SOCS5 2 0.001411 0.01689
24 FAM129B 9 0.002028 0.01949
25 SLC35C2 20 0.002029 0.001766
26 ZNF479 7 0.002072 0.008996
27 LOC100128023 3 0.002103 0.05897
28 KLRC1 12 0.002125 0.01421
29 GNG8 19 0.002175 0.002144
30 DLL4 15 0.002208 0.01759
31 PLEKHG1 6 0.002319 0.1245
32 LOC349114 7 0.002377 0.006306
33 HIVEP3 1 0.002497 0.0005597
34 DSG2 18 0.002616 0.03342
35 ZZZ3 1 0.002619 9.72E-05
36 CD63 12 0.002669 0.001587
37 ZP1 11 0.00267 0.00567
38 MRI1 19 0.0028 0.0006096
39 LOC339788 2 0.002806 0.08376
40 PRB1 12 0.00281 0.002012