Table 1.
Taphrina Genome Assemblies
| Species Name | Strain | Assembly Size (bp) | Number of Scaffolds | Average Scaff Size (kb) | Largest Scaff Size (kb) | N50 (kb) | N50 (Number) | N90 (kb) | N90 (Number) | Full Cegma (%) | GC Content (%) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Taphrina wiesneri | JCM 22204 | 13,070,656 | 225 | 58.1 | 584.8 | 304.1 | 17 | 71.6 | 47 | 98.79 | 47.8 |
| T. deformans | JCM 22205 (= NRRL Y-17787) | 13,778,166 | 529 | 26 | 398.7 | 182.6 | 28 | 25.9 | 97 | 98.79 | 48.9 |
| T. deformansa | PYCC 5710 (= CBS 356.35) | 13,364,053 | 394 | 33.9 | 244.1 | 71.9 | 61 | 17.5 | 203 | 98.7 | 49.5 |
| T. populina | JCM 22190 (= CBS 337.55) | 11,999,082 | 335 | 35.8 | 892.8 | 172.6 | 20 | 35.7 | 76 | 98.39 | 47.3 |
| T. flavorubra | JCM 22207 | 15,727,932 | 865 | 18.2 | 480.9 | 177.6 | 30 | 7.9 | 149 | 98.39 | 48.9 |
aPublished by Cissé et al. (2013).