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. 2012 Jul 26;1(2):222–244. doi: 10.3390/biology1020222

Figure 14.

Figure 14

Histogram showing the normalized frequency distribution of the sidechain dihedral angle χ1 of Glu396 over the simulations of the apo (black), EFV (red) bound and NVP (blue) bound HIV-1 RT ensemble trajectories. Two states are apparent for all three structures, however the balance in occupation is shifted to that with a lower angle in the EFV and NVP bound simulations.