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. 2012 Oct 25;1(3):575–596. doi: 10.3390/biology1030575

Table 3.

Summary statistics (population genomics).

Comparison H. annuus-H. debilis H. annuus-H. petiolaris H. debilis-H. petiolaris
Mean FST per gene (13,412 genes) 0.28 0.23 0.25
Median FST per gene (13,412 genes) 0.26 0.22 0.21
Coding SNPs (12,310 Open Reading Frames)
Synonymous polymorphic SNPs (Ps) 147,193 162,867 174,480
Non-synonymous polymorphic SNPs (Pn) 104,969 116,701 126,668
Synonymous fixed (FST > 0.9) SNPs (Ds) 3,339 2,612 865
Non-synonymous fixed (FST > 0.9) SNPs (Dn) 3,581 2,935 873
alpha (proportion of base substitutions fixed by natural selection) and confidence intervals 0.26 0.29 0.19
[0.22–0.31] [0.24–0.34] [0.11–0.29]
G-statistic (p-value) * 239 231 23
(2.2e–16) (2.2e–16) (1.4e–6)
d N /d S 0.22 0.24 0.22

* G-test conducted as in [27].