FIG. 2.

Recombinant Identification Program (RIP) and similarity plot analysis were performed for GXDY1299 to identify parental subtypes. (A) Similarity distance analysis was performed using RIP from the Los Alamos National Laboratory HIV Database with default settings, except for the window size of 300. (B) Similarity plots for GXDY1299 using SimPlot software with subtype reference strains CRF01_AE, CRF08_BC, and J. These reference strains were verified above by RIP, which may contain the segments of GXDY1299.