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. 2011 Oct 24;32(12):1522–1528. doi: 10.1038/aps.2011.122

Table 1. Target sequences and the design of molecular beacons.

Gene Sequences
Survivin Target: 5′-ATGGGTGCCCCGACGTTGCCCCCTGCC TGGCAGCCCTTTCTC aagg ACCACCGCATCTCTAC ATTCAAGAACTGGCCC-3′ Donor MB: 5′-/Cy3/GAGAAAGGGCTGCCATTCTC/BHQ-2/-3′ Acceptor MB: 5′-/BHQ-3/ACCACGTAGAGATGCGGTGGT/Cy5/-3′ Donor MB: 5′-/FAM/GAGAAAGGGCTGCCATTCTC/BHQ-2/-3′ Acceptor MB: 5′-/BHQ-3/ACCACGTAGAGATGCGGTGGT/Cy3/-3′
Random Target: 5′-ATCGGTGCGCTTGTCG-3′ Donor MB: 5′-/Cy3/CACGTCGACAAGCGCACCGATACGTG/BHQ-2/-3′ Acceptor MB: 5′-/BHQ-3/ACGTGCGACAAGCGCACCGATCACGT/Cy5/-3′

Molecular beacon (MB): underlined bases, bases added to create the stem domain. Target: lowercase bold, bases between two target sequences of the donor and acceptor beacon11.