Table 1.
Parameters for Nuclear Quantitation From Aperio’s Image Analysis Tool Box
| Parameter | Value |
|---|---|
| Version | 9.1 |
| View width | 1,000 |
| View height | 1,000 |
| Overlap size | 100 |
| Image zoom | 1 |
| Classifier | None |
| Classifier neighborhood | 0 |
| Averaging radius (pixels) | 3 |
| Curvature threshold | 1 |
| Segmentation type | 1 |
| Threshold type | 2 |
| Lower intensity threshold | 0 |
| Upper intensity threshold | 200 |
| Minimum nuclear size (pixels) | 80 |
| Maximum nuclear size (pixels) | 1,200 |
| Minimum roundness | 0.1 |
| Minimum compactness | 0 |
| Minimum elongation | 0.1 |
| Remove light objects | 0 |
| Weak (1+) threshold | 190 |
| Moderate (2+) threshold | 1 |
| Strong (3+) threshold | 1 |
| Black threshold | 0 |
| Edge trim | Weighted |
| Markup image type | Analysis |
| Nuclear red OD | 0.730342 |
| Nuclear green OD | 0.574991 |
| Nuclear blue OD | 0.368763 |
| Positive red OD | 0.244583 |
| Positive green OD | 0.509334 |
| Positive blue OD | 0.825081 |
| Color (3) red OD | 0 |
| Color (3) green OD | 0 |
| Color (3) blue OD | 0 |
| Clear area intensity | 240 |
| Use mode | Analysis/tuning |
| Classifier type | IHC nuclear |
| Classifier definition file | IHC nuclear training |
IHC, immunohistochemistry; OD, optical density.