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Snapshots of HAFP hairpin from the 200 ns MD simulations on DMPC bilayer for starting orientations with rotation angle 20° (A,B) and 0° (C,D) at neutral pH (A,C) and low pH (B,D). Hydrophobic residues are highlighted in yellow and hydrophilic residues in red. The acidic groups (E11 and D19) are also illustrated. Tan spheres are phosphorus, and blue are nitrogen.
