Table 3. Common altered mRNAs (including class III) extracted from 11 human cancers using digital differential display (DDD), together with the available online microarray.
Gene symbol | location | PCSR | Cancer cell type | Expression class | |||||||||||||||||||||
Breast | Endometrial | Ovarian | Prostate | Testicular | Colorectal | Liver | Gastric | Pancreatic | Glioblastoma | Lung | |||||||||||||||
M | D | M | D | M | D | M | D | M | D | M | D | M | D | M | D | M | D | M | D | M | D | ||||
ZEB2 | chr2q22.3 | ✓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | Class III | |||||||||||||
ZEB1 | chr10p11.22 | - | ↓ | ↓ | ↑ | ↓ | ↓ | ↑ | ↑ | ↑ | ↓ | Class III | |||||||||||||
KRT8 | chr12q13.13 | - | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | ↓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | |||||||
ANXA2 | chr15q22.2 | ✓ | ↑ | ↑ | ↓ | ↑ | ↓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | |||||||||||
IGF2BP3 | chr7p11 | ✓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | Class III | ||||||||||||
DDX5 | chr17q23.3 | - | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↓ | ↓ | ↓ | Class III | ||||||||||||
CD24 | chryq11.22 | ✓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | ↑ | ↓ | ↑ | ↓ | ↑ | ↑ | Class III | |||||||||
TOP2A | chr17q21.2 | ✓ | ↓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | ||||||||||||
DCN | chr12q21.33 | ✓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↓ | Class III | |||||||||||
CENPF | chr1q41 | - | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | |||||||||||||
LIFR | chr5p13.1 | ✓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↓ | ↓ | Class III | ||||||||||||||
ABCA8 | chr17q24.2 | ✓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↓ | ↓ | ↓ | Class III | |||||||||||||
COL11A1 | chr1p21.1 | ✓ | ↑ | ↑ | ↓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | |||||||||||||
RSAD2 | chr2p25.2 | ✓ | ↑ | ↑ | ↑ | ↑ | ↓ | ↓ | ↑ | ↑ | Class III | ||||||||||||||
Cd36 | chr7q21.11 | ✓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↑ | Class III | |||||||||||||||
PCDH7 | chr4p15.1 | ✓ | ↑ | ↓ | ↑ | ↑ | ↑ | ↓ | ↑ | ↑ | Class III | ||||||||||||||
PKIB | chr6q22.31 | ✓ | ↑ | ↓ | ↓ | ↑ | ↓ | ↑ | ↓ | ↓ | ↓ | ↑ | Class III | ||||||||||||
EDNRB | chr13q22.3 | ✓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | Class III | |||||||||||||
SULF1 | chr8q13.1 | ✓ | ↑ | ↑ | ↓ | ↓ | ↑ | ↑ | ↑ | ↑ | ↑ | ↑ | Class III | ||||||||||||
DIO2 | chr14q31.1 | ✓ | ↑ | ↑ | ↑ | ↓ | ↑ | ↑ | ↑ | ↑ | Class III | ||||||||||||||
TMC5 | chr16p12.3 | ✓ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | ↑ | ↓ | Class III | ||||||||||||||
HS6ST2 | chrXq26.2 | ✓ | ↓ | ↓ | ↓ | ↑ | ↑ | ↑ | ↑ | ↓ | ↑ | Class III | |||||||||||||
PTGS2 | chr1q31.1 | ✓ | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | Class III | ||||||||||||||||
GPM6A | chr4q34.2 | ✓ | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↑ | ↓ | Class III | |||||||||||||
C7 | chr5p13.1 | ✓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↓ | ↑ | ↓ | Class III | ||||||||||||
MT1M | chr16q12.2 | ✓ | ↓ | ↓ | ↑ | ↓ | ↓ | ↓ | ↑ | ↓ | Class III |
Abbreviations: PCSR, Potential Cancer-Susceptibility Region; M, Microarray; D, Digital Differential Display.
Symbols: ↑, over-expression; ↓, down-expression; ✓, risk region.