Table 1. Detection of respiratory tract pathogens from 4242 pediatric patients with ARI by real-time PCR.
Pathogens# | infA | infB | RSV | EV | ADV | PIV1 | PIV2 | PIV3 | PIV4 | 229E | OC43 | NL63 | HKU1 | HBoV | HMPV | MP | CP | Detection rate in 2361positive samples, % |
infA | 428 | 16 | 63 | 32 | 12 | 6 | 4 | 7 | 0 | 5 | 18 | 4 | 2 | 7 | 7 | 19 | 0 | 18.1 |
infB | 155 | 13 | 9 | 1 | 0 | 1 | 5 | 0 | 0 | 1 | 0 | 1 | 2 | 5 | 5 | 2 | 6.6 | |
RSV | 768 | 63 | 21 | 7 | 12 | 10 | 1 | 8 | 19 | 10 | 1 | 17 | 8 | 16 | 5 | 32.5 | ||
EV | 313 | 16 | 12 | 1 | 10 | 1 | 3 | 9 | 5 | 0 | 10 | 10 | 10 | 2 | 13.3 | |||
ADV | 213 | 1 | 3 | 3 | 1 | 3 | 4 | 5 | 1 | 7 | 5 | 10 | 2 | 9.0 | ||||
PIV1 | 67 | 2 | 1 | 0 | 0 | 4 | 1 | 0 | 3 | 0 | 6 | 0 | 2.8 | |||||
PIV2 | 51 | 3 | 0 | 2 | 8 | 0 | 0 | 1 | 1 | 2 | 0 | 2.2 | ||||||
PIV3 | 140 | 0 | 0 | 9 | 1 | 0 | 6 | 2 | 9 | 1 | 5.9 | |||||||
PIV4 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0.5 | ||||||||
229E | 37 | 5 | 2 | 0 | 0 | 2 | 1 | 0 | 1.6 | |||||||||
OC43 | 138 | 2 | 0 | 4 | 6 | 11 | 2 | 5.8 | ||||||||||
NL63 | 39 | 1 | 1 | 1 | 1 | 1 | 1.7 | |||||||||||
HKU1 | 17 | 3 | 0 | 5 | 0 | 0.7 | ||||||||||||
HBoV | 125 | 3 | 10 | 0 | 5.3 | |||||||||||||
HMPV | 173 | 4 | 0 | 7.3 | ||||||||||||||
MP | 267 | 1 | 11.3 | |||||||||||||||
CP | 23 | 1.0 | ||||||||||||||||
Single pathogen | 264 | 102 | 555 | 170 | 140 | 35 | 23 | 89 | 7 | 16 | 62 | 12 | 6 | 68 | 126 | 174 | 11 | 78.7 |
Co-pathogens | 164 | 53 | 213 | 143 | 73 | 32 | 28 | 51 | 4 | 21 | 76 | 27 | 11 | 57 | 47 | 93 | 12 | 21.3 |
229E: human coronavirus 229E, OC43: human coronavirus OC43, NL63: human coronavirus NL63, HKU1: human coronavirus HKU1.
*Boldface indicates total numbers of pathogens detected. Note: multiple pathogens were isolated from some samples.