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. 2014 May 5;9(5):e96674. doi: 10.1371/journal.pone.0096674

Table 1. Detection of respiratory tract pathogens from 4242 pediatric patients with ARI by real-time PCR.

Pathogens# infA infB RSV EV ADV PIV1 PIV2 PIV3 PIV4 229E OC43 NL63 HKU1 HBoV HMPV MP CP Detection rate in 2361positive samples, %
infA 428 16 63 32 12 6 4 7 0 5 18 4 2 7 7 19 0 18.1
infB 155 13 9 1 0 1 5 0 0 1 0 1 2 5 5 2 6.6
RSV 768 63 21 7 12 10 1 8 19 10 1 17 8 16 5 32.5
EV 313 16 12 1 10 1 3 9 5 0 10 10 10 2 13.3
ADV 213 1 3 3 1 3 4 5 1 7 5 10 2 9.0
PIV1 67 2 1 0 0 4 1 0 3 0 6 0 2.8
PIV2 51 3 0 2 8 0 0 1 1 2 0 2.2
PIV3 140 0 0 9 1 0 6 2 9 1 5.9
PIV4 11 0 0 0 0 0 0 1 0 0.5
229E 37 5 2 0 0 2 1 0 1.6
OC43 138 2 0 4 6 11 2 5.8
NL63 39 1 1 1 1 1 1.7
HKU1 17 3 0 5 0 0.7
HBoV 125 3 10 0 5.3
HMPV 173 4 0 7.3
MP 267 1 11.3
CP 23 1.0
Single pathogen 264 102 555 170 140 35 23 89 7 16 62 12 6 68 126 174 11 78.7
Co-pathogens 164 53 213 143 73 32 28 51 4 21 76 27 11 57 47 93 12 21.3
#

229E: human coronavirus 229E, OC43: human coronavirus OC43, NL63: human coronavirus NL63, HKU1: human coronavirus HKU1.

*Boldface indicates total numbers of pathogens detected. Note: multiple pathogens were isolated from some samples.