Table 1. Features of binned contigs for genomes of thaumarchaeota, epsilon- and gammaproteobacteria (≥ 5 Kb contigs).
Thaumarchaeota | Epsilonproteobacteria | Gammaproteobacteria | ||||
AR | SJ | AR | SJ | AR | SJ | |
Size (Mbp) | 3.44 | 1.65 | 2.12 | 2.12 | 0.47 | 3.00 |
No. of predicted genes | 4,148 | 1,934 | 2,136 | 2,138 | 512 | 2,907 |
No. of contigs | 58 | 15 | 11 | 13 | 49 | 63 |
Average contig size (Kb) | 59 | 110 | 193 | 163 | 9 | 47 |
Average GC content (%) | 33.83 | 34.31 | 39.37 | 39.39 | 52.37 | 53.42 |
Average gene length (bp) | 737 | 760 | 903 | 903 | 818 | 924 |
Coding percentage (%) | 88.9 | 89.1 | 91.0 | 91.0 | 89.4 | 89.7 |
Genome coverage (X) | 34 | 42 | 71 | 67 | 7 | 12 |
RNA genes | ||||||
23S | 2 | 1 | ND | ND | ND | ND |
16S | 2 | 1 | ND | ND | ND | ND |
5S | 2 | 1 | ND | ND | ND | ND |
ND, not detected.