TABLE 3.
Distribution of the SITs found in this study in the SITVIT_WEB database
| SITa | No. of isolatesc |
||
|---|---|---|---|
| Total | FSU and surrounding areasb | Rest of the world | |
| 933 | 8 | 5 (4 RUS, 1 FIN) | 1 PER, 2 USA |
| 60 | 181 | 1 (1 RUS) | 2 ARG, 3 AUT, 2 BEL, 28 BRA, 4 CUB, 2 DEU, 2 ALG, 1 ESP, 8 FRA, 1 UK, 7 GMB, 5 GNB, 2 GUF, 8 ITA, 1 JPN, 3 MOR, 1 MDG, 3 MEX, 1 MOZ, 2 NLA, 2 POR, 2 PAR, 8 SAU, 1 SEN, 9 TUN, 8 USA, 11 VEN, 40 ZAF, 1 ZAM |
| 20 | 594 | 10 (3 RUS, 4 EST, 1 FIN, 1 GEO, 1 TUR) | 2 ARG, 2 AUS, 1 AUT, 15 BEL, 83 BRA, 5 GUA, 11 GUF, 26 HAI, 7 MEX, 1 PER, 2 PHI, 49 POR, 1 PAR, 3 SWE, 1 TUN, 26 VEN, 24 ZAF, 2 ZAM, 7 CAM, 5 CUB, 10 DEU, 10 ESP, 17 FRA, 1 UK, 10 GNB, 3 GUB, 5 ITA, 1 MOZ, 11 MLW, 1 NMB, 13 NLA, 3 TNZ, 154 USA, 1 VNM |
| 1321 | 11 | 1 ARG, 2 BRA, 1 GUF, 2 IND, 3 POR, 1 USA | |
| 1277 | 16 | 2 ARG, 2 BRA, 8 DOM, 1 ESP, 3 USA | |
| 150 | 74 | 3 (1 RUS, 1 FIN, 1 TUR) | 6 ARG, 22 BEL, 7 BRA, 1 ALG, 1 EGY, 9 POR, 5 VEN, 3 MOR, 8 FRA, 2 GUF, 6 ITA, 1 MEX |
| 766 | 23 | 12 (5 EST, 1 FIN, 1 TUR) | 1 BNG, 1 FRA, 1 NLA, 1 POR, 7 SAU |
| 254 | 121 | 75 (50 RUS, 9 GEO, 2 AZE, 1 KAZ, 6 LAT, 1 FIN, 1 POL, 5 TUR) | 9 ZAF, 1 TAN, 12 USA, 1 SAU, 1 FRA, 1 ESP, 1 DEN, 2 DEU, 2 BRA, 1 BEL, 10 AUT, 1 NLA, 3 ITA |
| 506 | 4 | 2 (2 RUS) | 1 USA, 1 MEX |
| 803 | 26 | 18 (7 RUS, 2 EST, 1 LAT, 5 GEO, 2 ARM, 1 POL) | 1 BEL, 1 BRA, 1 CHN, 2 VNM, 1 SAU, 1 SWE, 1 USA |
| 264 | 45 | 44 (22 RUS, 3 LAT, 8 GEO, 10 POL, 1 TUR) | 1 DEU |
| 444 | 33 | 3 (1 RUS, 1 GEO, 1 KAZ) | 26 USA, 1 DEU, 3 AUT |
| 267 | 15 | 7 (2 RUS, 1 UKR, 4 GEO) | 2 DEU, 1 BEL, 3 USA, 2 LBY |
| 263 | 5 | 5 (4 RUS, 1 FIN) | |
| 252 | 42 | 39 (36 RUS, 3 LAT) | 3 SAU |
| 496 | 6 | 6 (5 RUS, 1 GEO) | |
| 560 | 6 | 4 (3 RUS, 1 GEO) | 1 USA, 1 BRA |
| 266 | 14 | 13 (12 RUS, 1 LAT) | 1 ALG |
| 251 | 13 | 7 (6 RUS, 1 FIN) | 2 USA, 3 MOR, 1 NLA |
| 1076 | 7 | 3 (3 RUS) | 2 BRA, 1 IDN, 1 MOZ |
SIT, spoligotype international type. SIT42 (which may include RD-Rio, RD115, RD115/LAM-RUS, or other sublineages) and SIT4 (which may represent different families due to convergent evolution) were excluded.
Countries of the former Soviet Union, Finland, Poland, Romania, Bulgaria, Turkey, and Iran.
Abbreviations: ALG, Algeria; ARG, Argentina; ARM, Armenia; AUS, Australia; AUT, Austria; AZE, Azerbaijan; BEL, Belgium; BNG, Bangladesh; BRA, Brazil; CAM, Cameroon; CHN, China; CUB, Cuba; DEN, Denmark; DEU, Germany; DOM, Dominican Republic; EGY, Egypt; ESP, Spain; EST, Estonia; FIN, Finland; FRA, France; GEO, Republic of Georgia; GMB, Gambia; GNB, Guinea Bissau; GUA, Guadeloupe; GUF, French Guiana; HAI, Haiti; IDN, Indonesia; IND, India; ITA, Italy; JPN, Japan; KAZ, Kazakhstan; LAT, Latvia; LBY, Libya; MDG, Madagascar; MEX, Mexico; MLW, Malawi; MOR, Morocco; MOZ, Mozambique; NLA, Netherlands; NMB, Namibia; PAR, Paraguay; PER, Peru; PHI, Philippines; POL, Poland; POR, Portugal; RUS, Russia; SAU, Saudi Arabia; SEN, Senegal; SWE, Sweden; TNZ, Tanzania; TUN, Tunisia; TUR, Turkey; UKR, Ukraine; VEN, Venezuela; VNM, Vietnam; ZAF, South Africa; ZAM, Zambia.