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. Author manuscript; available in PMC: 2014 Aug 1.
Published in final edited form as: Genomics. 2013 Apr 11;102(2):112–122. doi: 10.1016/j.ygeno.2013.04.004

Table 4.

Functional gene cluster classifications using the Database for Annotation, Visualization and Integrated Discovery (DAVID) for enrichment scores (ES) > 1.3.

Gene functional classification Top 3 associated annotation terms


Gene cluster N. of genes Enrichment score Annotation category Annotation term Enrichment fold
1 37 1.91 UP_SEQ_FEATURE transmembrane region 3.79
SP_PIR_KEYWORDS transmembrane 3.76
SP_PIR_KEYWORDS membrane 2.99
2 8 1.78 SP_PIR_KEYWORDS Immunoglobulin domain 35.81
INTERPRO IPR007110:Immunoglobulin-like 29.10
INTERPRO IPR003598:Immunoglobulin subtype 2 60.95
3 4 1.70 UP_SEQ_FEATURE domain:Sema 462.41
PIR_SUPERFAMILY PIRSF005526:semaphorin 396.21
INTERPRO IPR001627:Semaphorin/CD100 antigen 403.04
4 6 1.56 UP_SEQ_FEATURE repeat:LRR 10 136.13
UP_SEQ_FEATURE repeat:LRR 9 117.98
UP_SEQ_FEATURE repeat:LRR 8 106.90