| Phenotypes (mutant alleles and RNAi), RNA expression, etc.
|
Community at large |
http://flybase.org/ |
Lyne et al. (2007); McQuilton et al. (2012); St Pierre et al. (2014) |
| http://www.flymine.org/ |
| RNA expression (various tissues) |
Dow lab |
http://flyatlas.gla.ac.uk |
Chintapalli et al. (2007); McQuilton et al. (2012); Robinson et al. (2013); St Pierre et al. (2014) |
| http://flyatlas.org/ |
| http://flybase.org/ |
| RNA expression (various stages, tissues, and treatments) |
modENCODE consortium |
http://flybase.org/ |
Contrino et al. (2012); McQuilton et al. (2012); St Pierre et al. (2014) |
| http://intermine.modencode.org/ |
| RNA expression (in cultured cells) |
modENCODE consortium |
www.flyrnai.org/cellexpress |
Cherbas et al. (2011); Flockhart et al. (2012) |
| https://dgrc.cgb.indiana.edu/cells/TilingSearch |
Contrino et al. (2012) |
| http://intermine.modencode.org/ |
| RNA localization |
FlyFish |
http://fly-fish.ccbr.utoronto.ca/ |
Kumar et al. (2011); Lecuyer et al. (2007) |
| FlyExpress |
http://www.flyexpress.net/ |
|
In vivo RNAi data (screen results) |
Community at large |
http://www.genomernai.org/ |
Horn et al. (2007) |
|
In vivo RNAi data (qPCR and phenotype data) |
Transgenic RNAi Project (TRiP) and community at large |
www.flyrnai.org/rsvp |
Flockhart et al. (2012); Ni et al. (2011) |
| Cell-based RNAi data |
Screen data from DRSC, DKFZ and other sources |
www.flyrnai.org/genelookup |
Flockhart et al. (2012); Horn et al. (2007) |
| www.flyrnai.org/screensummary |
| www.genomernai.org |
| Cell-based RNAi data (in protein network context) |
Screen data from DRSC, DKFZ and other sources |
www.flyrnai.org/SignedPPI/ |
Vinayagam et al. (2013b) |
| Protein interaction data (large-scale cell-based mass spec study) |
DPiM Project |
http://droidb.org/ |
Guruharsha et al. (2011); Yu et al. (2008) |
| https://interfly.med.harvard.edu |
| Protein interaction data (large-scale binary/mass spec studies) |
Various large-scale and community efforts |
http://droidb.org/ |
Yu et al. (2008) |
