Table 2. Results of fitting the linear regression model in Equation 3 to codon usage in ssDNA Enterobacteria phages parasitizing E. coli, with viral genome accession number (ACCN), viral genome length (L), number of viral genes (Ng), the estimated intercept (BC→T) and slope (b), the Pearson correlation between PU and φ for each phage species, and the statistical significance (two-tailed P) of the relationship.
| Phage | ACCN | L | Ng | BC→T | b | R | P |
|---|---|---|---|---|---|---|---|
| Phage alpha3 | NC_001330 | 6087 | 10 | 0.7022 | 0.3790 | 0.3936 | 0.1315 |
| Phage G4 | NC_001420 | 5577 | 11 | 0.5707 | 0.6609 | 0.5912 | 0.0159 |
| Phage ID18 | NC_007856 | 5486 | 11 | 0.5876 | 0.6551 | 0.5105 | 0.0433 |
| Phage ID2 | NC_007817 | 5486 | 11 | 0.5443 | 0.5820 | 0.5055 | 0.0458 |
| Phage phiX174 | NC_001422 | 5386 | 11 | 0.6965 | 0.2840 | 0.2969 | 0.2641 |
| Phage St-1 | NC_012868 | 6094 | 11 | 0.6881 | 0.2895 | 0.3048 | 0.2511 |
| Phage WA13 | NC_007821 | 6068 | 10 | 0.7122 | 0.2190 | 0.2354 | 0.3801 |
| Phage I2-2 | NC_001332 | 6744 | 9 | 0.6987 | 0.3301 | 0.2649 | 0.3214 |
| Phage If1 | NC_001954 | 8454 | 10 | 0.6551 | −0.0763 | −0.0819 | 0.7629 |
| Phage Ike | NC_002014 | 6883 | 10 | 0.7419 | 0.1614 | 0.1097 | 0.6858 |
| Phage M13 | NC_003287 | 6407 | 10 | 0.7390 | 0.1717 | 0.1899 | 0.4812 |