Table 4. Counts of outlier 1-kb windows in two clinal samples at three empirical cutoffs.
| Chromosome | Australian count | North American count | Both count | P-value |
|---|---|---|---|---|
| 5% tail | ||||
| X | 727 | 976 | 59 | 0.00067 |
| 2L | 892 | 992 | 93 | 4.12E-10 |
| 2R | 477 | 458 | 38 | 5.15E-07 |
| 3L | 747 | 711 | 47 | 0.00227 |
| 3R | 1508 | 1215 | 186 | <2.2e-16 |
| GW | 4351 | 4352 | 423 | <2.2e-16 |
| 2.5% tail | ||||
| X | 395 | 544 | 16 | 0.1237 |
| 2L | 423 | 464 | 20 | 0.00518 |
| 2R | 274 | 227 | 15 | 4.78E-05 |
| 3L | 339 | 354 | 18 | 0.00021 |
| 3R | 745 | 587 | 41 | 0.00032 |
| GW | 2176 | 544 | 110 | 5.43E-12 |
| 1% tail | ||||
| X | 180 | 233 | 2 | 0.665095 |
| 2L | 148 | 178 | 3 | 0.17059 |
| 2R | 144 | 80 | 5 | 0.00147 |
| 3L | 117 | 145 | 3 | 0.07455 |
| 3R | 282 | 235 | 9 | 0.009 |
| GW | 871 | 871 | 22 | 9.24E-05 |
The total number of windows included in the intersection analysis was 86,216. This included 17,875 windows on chromosome X, 18,470 windows on chromosome 2L, 13,767 windows on chromosome 2R, 17,339 windows on chromosome 3L, and 18,765 windows on chromosome 3R. The number of outlier windows shared by both samples in given in the “Both count” column. P-values are from hypergeometric tests.