Table 1. Average and standard deviation of analytical power and of the parameters related to power.

	Power (MK_Freq)	CorK_Freqa	CorK_Chrb	MAFc	Fstd
Panel	Average	SD	Average	SD	Average	SD	Average	SD	Average	SD
C-K	0.113	0.090	0.087	0.032	0.083	0.029	0.269	0.132	0.112	0.116
CF-Dent	0.090	0.081	0.103	0.033	0.093	0.030	0.260	0.139	0.146	0.118
CF-Flint	0.088	0.086	0.094	0.032	0.088	0.030	0.240	0.147	0.083	0.076

Analytical power of model M_{K_Freq} was estimated in each panel (reduced to a size of 267 individuals), assuming a heritability of 0.8, a marker effect that would explain 8% of the background genetic variance if it had a MAF of 0.5 and a type I risk of 0.05 with a Bonferroni correction on 40,000 tests.

^aCorrelation between the kinship matrix estimated with a single marker (K_Freq_M_l) and the kinship matrix estimated with all the PANZEA markers (K_Freq).

^bCorrelation between the kinship matrix estimated with a single marker (K_Freq_M_l) and the kinship matrix estimated with all the PANZEA markers except those located on the same chromosome.

^cMinor allele frequency.

^dNei’s differentiation index among genetic groups.