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| Intron name | Heterozygous positions (M. l., M.d.) | Alignment length (bp) | Number of differences | Number and length of indels |
| Abcb9-2 | 0, 0 | 403 | 1 | |
| Agxt-10 | 0, 0 | 376 | 2 | 2 indels: 1 bp, 1 bp |
| Catsper3-5 | 0, 0 | 311 | 6 | 2 indels: 4 bp, 10 bp |
| Dhcr24-7 | 1, 1 | 340 | 3 | |
| Ivd-8 | 1, 1 | 528 | 3 | 1 indel: 3 bp |
| Nadsyn1-4 | 3, 0 | 491 | 4 | |
| Rras-4 | 1, 0 | 506 | 1 | 1 indel: 6 bp |
| Smo-9 | 0, 0 | 398 | 4 | |
| Wls-7 | 3, 0 | 367 | 4 |
