Figure 4. Tabulated changes in cytosine methylation of all three sequence contexts, CG, CHG and CHH at the 5′- and 3′-LTRs along with their contiguous flanks (for 5′- LTRs) or contiguous flanks and immediate body (for 3′-LTRs) in both original copies of Tos17 in TC-reg-2008 vs. WT, based on bisulfite sequencing (for original data see Figure S4).

(A) The schematic diagram of Tos17 structure. The regions subjected to bisulfite sequencing were delineated. (B) Methylation changes of each sequence context in TC-reg-2008 (red bars) vs. WT (black bars) in the Tos17 copy located on chromosome 10. (C) Methylation changes of each sequence context in TC-reg-2008 (red bars) vs. WT (black bars) in the Tos17 copy located on chromosome 7.