Table 3.
The performance of the QA predictor in terms of average correlation, overall correlation, average real GDT-TS score of top 1 models ranked by each method, and average loss of top 1 models ranked by each method, evaluated on 8 FM (free modeling) CASP9 single-domain targets
| Avg. correlation | Over. correlation | Avg. top 1 | Avg. loss | |
|---|---|---|---|---|
|
Basic (85 targets) |
0.577 |
0.516 |
0.267 |
0.078 |
|
Profile |
0.590 |
0.427 |
0.254 |
0.091 |
|
Profile + SOV |
0.586 |
0.431 |
0.267 |
0.078 |
| M.-NOVEL |
0.386 |
0.480 |
0.235 |
0.115 |
| ProQ |
0.478 |
0.437 |
0.266 |
0.090 |
| ProQ2 |
0.529 |
0.465 |
0.289 |
0.066 |
| QMEAN | 0.507 | 0.456 | 0.266 | 0.090 |
Top 3 QA predictors’ performances according to each metric were bolded.