Table 2.

Oligonucleotide primers used for RT-LAMP assay

Primer name	Sequence (5′–3′)	Genome position
FIP = F1c + F2	TTCAGGAATCCCTGAAGGTG-ATCGTCGGMGAGGAVAAGG	F1c,203–222, F2,167–185
BIP = B1c + B2	GCGMGAGCTGCCGCCCT-TCTTCVTCAGATCCCCGG	B1c,236–252, B2,292–309
F3	AGTTBTGCACGCTCGACAAT	135–154
B3	GTCGACTCTTTGGMGCAATA	320–339
LoopF	AGGYGTVCCVTTCGCGC	186–202
LoopB	AGGAAGAGCCTGGCTCTC	268–285

Genome position according to the DuCV complete genome sequence (GenBank accession no. DQ100076).

Abbreviations are as follows: M = A or C; V = A or C or G; B = T or G or C.