(b).
Resolution (Å) | 56–2.5 (2.565–2.500) |
No. of reflections | 13249 (9055) |
No. of atoms | 22670 [16 × 164 residues] |
Observation-to-parameter ratio† | 1.45 |
R work (%) | 21.0 (39.7) |
R free (%) | 24.7 (40.0) |
R.m.s.d., bonds (Å) | 0.0066 |
R.m.s.d., angles (°) | 1.39 |
Ramachandran plot (%) | |
Most preferred areas | 97.2 |
Most preferred plus allowed areas | 99.9 |
Preferred side-chain rotamers | 99.7 |
PDB code | 4lr3 |
The observation-to-parameter ratio is calculated from the number of independent observations divided by four (x, y, z and B) times the number of atoms. With such a modest ratio, we found that the removal of NCS restraints in the refinement led to large differences between working and free R factors, so we kept them until the very last two cycles of refinement. Because the amplitude differences between fourfold NCS-rotated indexes differed by 51–55% owing to the misalignment of NCS axes with respect to the crystallographic axis, the cross-validation set was chosen randomly.