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. 2014 May 8;10(5):e1003614. doi: 10.1371/journal.pcbi.1003614

Figure 7. Impact of basal HK activities on the occurrence of ultrasensitivity.

Figure 7

(A) Extended Batchelor-Goulian model (cf. Fig. 2C) with basal HK activities (dashed lines): Autophosphorylation (Inline graphic), phosphotransfer (Inline graphic) and phosphatase activity (Inline graphic). (B) Scheme summarizing the allowed transitions between different enzyme states in the extended model with basal activities. It is assumed that ligand-binding occurs with reduced affinity (Inline graphic) if the sensor kinase has already undergone autophosphorylation (Inline graphic). To prevent cycle fluxes under steady state conditions it is required that Inline graphic. (C) Basal autokinase and phosphotransferase activities hardly affect the response curve. Even if the basal activities are identical to their full activities (Inline graphic, Inline graphic, Inline graphic, Inline graphic) the transition point (Inline graphic) remains almost the same and the steepness of the response curve is only slightly reduced (dashed curve). Basal phosphatase activity is assumed to be zero (Inline graphic, Inline graphic). The blue curve is the same as that shown in Fig. 6A where both basal activities are zero. (D) In contrast, upon increasing basal phosphatase activity the steepness of the response curve (ultrasensitivity) becomes substantially reduced. Dashed lines correspond to Inline graphic and increasing values of Inline graphic for Inline graphic (blue curve), Inline graphic, Inline graphic, Inline graphic, Inline graphic. Basal autokinase and phosphotransferase activities are assumed to be zero (Inline graphic). Other parameter values are the same as for the blue curve in Fig. 6A. Simulations were done using Eqs. (64).