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. Author manuscript; available in PMC: 2014 May 9.
Published in final edited form as: Biol Psychiatry. 2011 Apr 22;70(1):64–72. doi: 10.1016/j.biopsych.2011.02.019

Figure 1.

Figure 1

Schematic overview of the analysis strategy. The analysis could be divided into four broad steps. First, a unique regressor was generated for every event, and event-specific evoked responses were estimated using a general linear model. The result was a map of β coefficients for each event, representing the degree to which each voxel’s activity was modulated by that event. Second, these event-specific β maps were sorted into different task conditions (cue A shown in blue, cue B show in red) and concatenated to generate a condition-specific pseudo–time series of β coefficients (i.e., a β series) at each voxel. Third, an anatomic template was used to parcellate the brain in 78 regions. The mean β series of each region was extracted, and correlations between every possible pair of regional beta series were computed to generate a {78 × 78} functional connectivity matrix for each participant and each task condition. Fourth, network connectivity and topology were analyzed using graph-based representations of network structure. Network connectivity was analyzed using the values in the correlation matrix. Edge-wise connectivity (SE) reflected the strength of the correlation for each value in the functional connectivity matrix. For example, in the connectivity matrix shown, SE for the connection between region of interest (ROI) 1 and ROI 2 would be .33. Region-wise connectivity (SR) was computed as the sum of each region’s correlation values. For example, SR for ROI 1 is computed as the sum of its correlation values with all other regions. Topologic measures were computed using graph-based representations of network structure as detailed in the main text and Section S.2 in Supplement 1. In the graph-based representation shown, each region is represented as a blue circle plotted according to the stereotactic coordinates of its centroid. Each connection, or edge, is represented as a red line and represents a suprathreshold correlation between regional beta series. The graph has been overlaid on a cortical surface rendering to provide an orientation with respect to approximate anatomical location.