Table 1. Summary statistics describing genome assemblies of Meloidogyne.

Species	Meloidogyne hapla	Meloidogyne incognita	Meloidogyne floridensis
Source	NCSU/WormBase WS227	INRA/WormBase WS227	959 Nematode Genomes Project
Data URL	ftp://ftp.wormbase.org/pub/wormbase/species/m_hapla/	ftp://ftp.wormbase.org/pub/wormbase/species/m_incognita/	http://downloads.nematodegenomes.org
Citation	Opperman et al. (2008)	Abad et al. (2008)	This work
Maximum scaffold length	360,446	154,116	40,762
Number of scaffolds	3,452	9,538	81,111
Assembled size (bp)	53,017,507	82,095,019	99,886,934
Scaffold N50* (bp)	37,608	12,786	3,516
GC%	27.4	31.4	29.7
CEGMA** completeness Full/Partial	92.74/94.35	75.00/77.82	60.08/72.18
Predicted proteins (used for clustering***)	13,072 (12,229)	20,359 (17,999)	15,327 (15,121)

Notes.

^*N50, weighted median contig length; the contig length at which 50% of the assembled genome is present in contigs of that or greater length.

^**CEGMA, Core Eukaryotic Genes Mapping Approach (Parra, Bradnam & Korf, 2007).

^***Predicted proteins used for clustering and inferring phylogenies after filtering for length >50 amino acids (see Methods).