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. 2014 May 12;9(5):e97127. doi: 10.1371/journal.pone.0097127

Table 1. Genotypes of the 11 segments of the CAU12-2-51 rotavirus strain with reference to strains available in the GenBank database.

Strain Genotype
VP7 VP4 VP6 VP1 VP2 VP3 NSP1 NSP2 NSP3 NSP4 SNP5
RVA/Human-tc/KOR/CAU12-2-51/2012/G3P[9] G3 P[9] I2 R2 C2 M2 A3 N2 T3 E3 H3
RVA/Human-wt/ITA/PAI58/1996/G3P[9] G3 P[9] I2 R2 C2 M2 A3 N2 T6 E2 H3
RVA/Human-tc/ITA/PAH136/1996/G3P[9] G3 P[9] I2 R2 C2 M2 A3 N1 T6 E2 H3
RVA/Cat-wt/AUS/BA222/2005/G3P[9] G3 P[9] I2 R2 C2 M2 A3 N1 T3 E2 H3
RVA/Human-tc/JPN/AU-1/1982/G3P3[9] G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H3
RVA/Human-tc/CHN/L62/2006/G3P[9] G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H6
RVA/Human-wt/CHN/E2451/2011/G3P[9] G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H6
RVA/Human-tc/THA/CU-365/2008/G3P[9] G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H6
RVA/Cat-tc/AUS/Cat2/1984/G3P[9] G3 P[9] I3 R3 C2 M3 A3 N1 T6 E3 H3
RVA/Human-wt/JPN/KF17/2009-2010/G6P[9] G6 P[9] I2 R2 C2 M2 A3 N2 T3 E3 H3
RVA/Human-wt/HUN/Hun5/1997/G6P[14] G6 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
RVA/Human-tc/USA/DS-1/1976/G2P1B[4] G2 P[4] I2 R2 C2 M2 A2 N2 T2 E2 H2
RVA/Human-tc/USA/Wa/1974/G1P1AP[8] G1 P[8] I1 R1 C1 M1 A1 N1 T1 E1 H1

Wa (G1P[8]), DS-1 (G2P[4]), and AU-1(G3P[9]) strains were used as references for genotype 1 (Wa-like), genotype 2 (DS-1 like), and genotype 3 (AU-1 like), respectively.