Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2014 May 6;5:111. doi: 10.3389/fgene.2014.00111

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2014 Trivedi, Cézard, Bridgett, Montazam, Nichols, Blaxter and Gharbi.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Taxon-annotated GC-coverage (TAGC) plots from a subset of randomly selected contigs for the mock-contaminated E. coli-human library. (A) TAGC-plot generated after alignment to a random subset of contigs (5) from CLC assembly; (B) TAGC-plot generated after alignment to to a random subset of contigs (5) from the SOAPdenovo2 assembly. Individual contigs are plotted based on GC (X axis) and read coverage (Y axis, logarithmic scale). Contigs are colored according to the taxonomic order of the best megablast match to the NCBI nt database (with E-value < 1e-50). Contigs without an annotated BLAST match are shown in gray.