Table 4.
Cross-validation results for experiment 2. AUC values above 0.60 and log-rank p-values below 0.05 are highlighted with an asterisk. Missing log-rank values could not be calculated because all predictions were for the same class
| Clinical | Treatments | Histology | DNA Methylation | Somatic Mutations | DNA Copy Number | mRNA Expression | miRNA Expression | All Data | ||
|---|---|---|---|---|---|---|---|---|---|---|
| AUC | C5.0 | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | 0.56 |
| NBC | 0.68* | 0.60 | 0.43 | 0.57 | 0.52 | 0.50 | 0.54 | 0.46 | 0.57 | |
| SVM | 0.51 | 0.50 | 0.46 | 0.51 | 0.35 | 0.43 | 0.46 | 0.45 | 0.42 | |
| Log-rank | C5.0 | – | – | – | – | – | – | – | – | 0.03* |
| NBC | 0.065 | – | – | 0.3 | 0.0048* | 0.42 | 0.006* | 0.17 | 0.6 | |
| SVM | – | – | – | 0.92 | 0.63 | – | – | – | – |