TABLE 3.
Season | Sampling (Julian) day | Relative abundance of the sul1 gene targeta |
|||||
---|---|---|---|---|---|---|---|
Control |
Swine |
Dairy |
|||||
Mean | SD | Mean | SD | Mean | SD | ||
Spring 2012 | 101 | 0.00002 | 0.00000 | 0.03661* | 0.01490 | 0.00042* | 0.00021 |
108 | 0.00008 | 0.00008 | 0.03245* | 0.01417 | 0.00191* | 0.00070 | |
131 | 0.00003 | 0.00003 | 0.01313* | 0.00676 | 0.00257* | 0.00115 | |
200 | 0.00003 | 0.00003 | 0.00207* | 0.00103 | 0.00050* | 0.00017 | |
221 | BLQ | 0.00072 | 0.00014 | 0.00010 | 0.00007 | ||
229 | 0.00002 | 0.00001 | 0.00028* | 0.00013 | 0.00007* | 0.00002 | |
254 | 0.00020 | 0.00020 | 0.00067* | 0.00018 | 0.00005 | 0.00001 | |
176 | 0.00002 | 0.00002 | 0.00042* | 0.00005 | 0.00003 | 0.00002 | |
210 | BLQ | 0.00065 | 0.00024 | 0.00004 | 0.00003 | ||
303 | 0.00002 | 0.00001 | 0.00035* | 0.00009 | 0.00004 | 0.00004 | |
Fall 2012 | 275 | 0.000004 | 0.000001 | 0.000727* | 0.000203 | 0.000188* | 0.000005 |
282 | 0.000005 | 0.000001 | 0.000638* | 0.000289 | 0.000377* | 0.000055 | |
306 | 0.000003 | 0.000000 | 0.000851* | 0.000411 | 0.000440* | 0.000104 | |
176 | 0.000008 | 0.000005 | 0.000139* | 0.000029 | 0.000037* | 0.000006 | |
210 | 0.000009 | 0.000002 | 0.000157* | 0.000072 | 0.000027* | 0.000010 | |
303 | BLD | 0.00027 | 0.000020 | 0.000100 | 0.000013 | ||
Spring 2013 | 127 | BLQ | 0.00096 | 0.00057 | 0.00034 | 0.00014 | |
134 | BLD | 0.00450 | 0.00170 | 0.00128 | 0.00030 | ||
158 | 0.00002 | 0.00000 | 0.00795* | 0.00244 | 0.00255* | 0.00134 | |
210 | BLD | 0.00042 | 0.00016 | 0.00008 | 0.00004 | ||
267 | BLD | 0.00047 | 0.00019 | 0.00008 | 0.00003 | ||
304 | BLQ | 0.00057 | 0.00026 | 0.00008 | 0.00005 |
The relative abundance of the gene target is referenced to the total rrnS gene copy number. BLD, below limit of detection; BLQ, below limit of quantification; *, significant difference at P values of <0.05.