TABLE 2.
Sequence conservation at the termini of genome segmentsa
| Segment | 3′ terminus (genomic orientation) | 5′ terminus (genomic orientation) |
|---|---|---|
| UPOV | ||
| 1 (PB2) | 3′-UCG UUA UCG UUC GUC AAAA GUA | 5′-AGA GAU AUC AAA GCA G UUU UUU |
| 2 (PB1) | UCG UUA UCG UCC GUC AAAA GUU | AGA GAU AUC AAG GCA G UUU UUU |
| 3 (PA) | UCG UUA UCG UUC GUC AAAA GUU | AGA GAA AUC AAA GCA G UUU UUU |
| 4 (HP) | UCG UUA UUG UCC GUC AAAA GUU | AGA GAA AUC AAG GCA G UUU UUU |
| 5 (NP) | UCG UUU UCG UCC GUC AAAA GUU | AGA GAC AUC AAG GCA G UUU UUC |
| 6 (M) | UCG UUA UUG UCC GUC AACA GAU | AGA GAU AUC AAG GCA G UUU UUU |
| ABV | ||
| 1 (PB2) | 3′-UCG UUA UCG UUC GUC AAAG UGA | 5′-AGA GAU AUC AAA GCA G UUU UUU |
| 2 (PB1) | UCG UUA UCG UCC GUC AAAA AGU | AGA GAU AUC AAG GCA G UUU UUU |
| 3 (PA) | UCG UUA UCG UUC GUC AAAA GUU | AGA GAA AUC AAA GCA G UUU UUC |
| 4 (HP) | UCG UUU UCG UCC GUC AAAA GUU | AGA GAA AUC AAG GCA G UUU UUU |
| 5 (NP) | UCG UUU UCG UCC GUC AAAA GUU | AGA GAU AUC AAG GCA G UUU UUU |
| 6 (M) | UCG UUA UCG UCC GUC AAAGAAU | AGA GAU AUC AAG GCA G UUU UUU |
| THOV | consensus, UCG UUU UUG UYC GYB WVCW KKK | consensus, AGA GAW AUC AAR GCR S UUU UUU |
| 1 (PB2) | 3′-UCG UUU UUG UUC GCU ACCU GUC | 5′-AGA GAA AUC AAG GCG A UUU UUC |
| 2 (PB1) | UCG UUU UUG UCC GCG AGGU UUG | AGA GAA AUC AAG GCG C UUU UUU |
| 3 (PA) | UCG UUU UUG UUC GUG AACU GUA | AGA GAA AUG AAA GCA C UUU UUU |
| 4 (HP) | UCG UUU UUG UUC GUC UACA AGG | NGA GAU AUC AAA GCA G UUU UUU |
| 5 (NP) | UCG UUU UUG UCC GUC AGUU UUA | AGA GAA AUC AAG GCA G UUU UUU |
| 6 (M) | UCACCU UUG UCC GUC ACCU CUA | AGA GAA AUC AAG GCA G UUU UUU |
| DHOV | ||
| 1 (PB2) | 3′-UCG UUU UUG UUC GUC AAAU CUG | 5′-AGA GAA AUC AAA GCA G UUU UUC |
| 2 (PB1) | UCG UUU UUG UUC GUC AACU GUC | AGA GAU AUC AAA GCA G UUU UUU |
| 3 (PA) | UCG UUU UUG UUC GUC AAUG GUG | AGA GAA AUC AAA GCA G UUU UUU |
| 4 (HP) | UCG UUU UUG UUC GUC AAUGCUA | AGA GAA AUC AAA GCA G UUU UUC |
| 5 (NP) | UCG UUA UUG UUC GUC AAAGCUU | AGA GAU AUC AAA GCA G UUU UUU |
| 6 (M) | UCG UUA UUG UUC GUC AUGA UCU | AGA GAA AUC AAA GCA G UUU UUU |
| JOSV | ||
| 1 (PB2) | 3′-UCG UUU UUG UUC NUC AAAA GUU | 5′-AGA GAA AUC AAA GCA G UUU UUU |
| 2 (PB1) | UCG UUU UUG UCC GUC AAAG GGU | NA |
| 3 (PA) | NA | guuucccaguaggucuc AGA GAU AUC AAG GCA G UUU UUU |
| 4 (HP) | UCG UUU UUC UCC UCA AAAA CCU | AGA GAA AUC AAG GCA G UUU UUU |
| 5 (NP) | UCG UUU UUC UCC UGU ACCU CGA | NA |
| 6 (M) | g UCACCU UUG UCC GUC AAAA GCU | AGA GAA AUC AAG GCA G UUU UUU |