TABLE 3.
Percent sequence identitiesa
| Sequence and virus | % sequence identity |
|||||
|---|---|---|---|---|---|---|
| UPOV | ABV | JOSV | THOV | DHOV | FLUAV | |
| PB2 (aa)/S1 (nt) | ||||||
| UPOV | 78.3 | 67.9 | 61.7 | 54.2 | 46.6 | |
| ABV | 92.1 | 68.1 | 62.1 | 54.4 | 47.8 | |
| JOSV | 71.1 | 71.3 | 62.4 | 53.5 | 49.7 | |
| THOV | 61.2 | 60.9 | 61.0 | 54.2 | 48.0 | |
| DHOV | 36.8 | 36.6 | 36.3 | 36.6 | 46.5 | |
| FLUAV | 22.5 | 21.9 | 20.7 | 22.3 | 22.7 | |
| PB1 (aa)/S2 (nt) | ||||||
| UPOV | 78.8 | 67.8 | 68.1 | 63.5 | 51.5 | |
| ABV | 92.7 | 68.1 | 68.2 | 62.9 | 51.2 | |
| JOSV | 75.1 | 76.1 | 66.2 | 61.5 | 50.1 | |
| THOV | 73.8 | 73.6 | 71.9 | 63.7 | 51.6 | |
| DHOV | 62.3 | 62.1 | 60.6 | 61.9 | 51.5 | |
| FLUAV | 28.4 | 28.8 | 29.3 | 30.3 | 32.1 | |
| PA (aa)/S3 (nt) | ||||||
| UPOV | 79.0 | 63.1 | 59.5 | 55.4 | 48.1 | |
| ABV | 86.0 | 63.8 | 60.7 | 55.5 | 48.5 | |
| JOSV | 63.1 | 64.8 | 58.7 | 53.7 | 43.0 | |
| THOV | 46.5 | 46.4 | 45.5 | 55.0 | 47.1 | |
| DHOV | 39.4 | 39.1 | 40.6 | 35.1 | 49.5 | |
| FLUAV | 22.0 | 23.5 | 23.2 | 22.4 | 24.3 | |
| GP (aa)/S4 (nt) | ||||||
| UPOV | 69.3 | 60.5 | 57.1 | 53.9 | 49.8 | |
| ABV | 67.1 | 59.5 | 55.7 | 53.2 | 50.0 | |
| JOSV | 52.9 | 51.9 | 55.5 | 54.6 | 44.8 | |
| THOV | 42.4 | 43.6 | 42.9 | 53.6 | 47.0 | |
| DHOV | 36.3 | 32.6 | 33.3 | 35.3 | 46.2 | |
| FLUAV | 22.0 | 19.3 | 21.6 | 21.1 | 19.4 | |
| NP (aa)/S5 (nt) | ||||||
| UPOV | 79.9 | 57.4 | 58.8 | 55.9 | 39.1 | |
| ABV | 89.1 | 59.2 | 59.6 | 56.7 | 48.1 | |
| JOSV | 64.3 | 65.2 | 63.6 | 52.7 | 42.1 | |
| THOV | 59.1 | 59.9 | 63.2 | 55.2 | 49.0 | |
| DHOV | 40.7 | 41.3 | 43.6 | 42.1 | 49.5 | |
| FLUAV | 22.4 | 23.0 | 21.2 | 21.0 | 23.0 | |
| M (aa)/S6 (nt) | ||||||
| UPOV | 81.9 | 64.4 | 60.0 | 50.3 | 49.7 | |
| ABV | 95.9 | 64.7 | 59.2 | 50.7 | 50.2 | |
| JOSV | 71.2 | 70.5 | 61.7 | 51.1 | 49.1 | |
| THOV | 45.4 | 43.5 | 48.7 | 51.3 | 48.0 | |
| DHOV | 27.9 | 28.3 | 28.5 | 23.4 | 47.4 | |
| FLUAV | 18.1 | 16.3 | 19.7 | 18.3 | 23.3 | |
a
Pairwise sequence identities between Upolu virus (UPOV), Aransas Bay virus (ABV), Jos virus (JOSV), Thogoto virus (THOV), Dhori virus (DHOV), and influenza A virus (FLUAV) at the nucleotide (nt) level (values above the diagonal) and at the amino acid (aa) level (values below the diagonal). S1, segment 1.