Table 1. Results of two-ratio model tests of selection pressure on the Tat gene in bats.
Modela | npb | ℓ | ω0 c | ωFix c | ModelCompared | 2Δℓ | P-valued |
0. One ratio: ω0 | 55 | −8406.72 | 0.165 | = ω0 | |||
1. Two ratios: ω0, ωA | 56 | −8394.02 | 0.153 | 0.585 | 1 vs. 0 | 25.398 | <0.001 |
2. Two ratios: ω0, ωB | 56 | −8403.56 | 0.166 | 0.0001 | 2 vs. 0 | 6.321 | >0.05 |
3. Two ratios: ω0, ωC | 56 | −8406.72 | 0.165 | 0.169 | 3 vs. 0 | 0.001 | >0.05 |
4. Two ratios: ω0, ωD | 56 | −8406.72 | 0.165 | 0.0001 | 4 vs. 0 | 0.001 | >0.05 |
5. Two ratios: ω0, ωE | 56 | −8406.51 | 0.165 | 0.078 | 5 vs. 0 | 0.422 | >0.05 |
6. Two ratios: ω0, ωF | 56 | −8406.62 | 0.164 | 0.237 | 6 vs. 0 | 0.187 | >0.05 |
See Figure 1B for branch labels.
np, number of parameters.
ωFix (ωA, ωB, ωC, ωD, ωE and ωF) and ω0, are the ω ratios for branches A, B, C, D, E, F and other branches, respectively.
The P-value of each test was multiplied by six (tested branches) to correct for multiple testing.