Table 1. Key Regions and Residues in HP Ureasea.
region | residue numbers and typesb |
---|---|
pentacoordinate Ni2+ | LYSα219(CO2–), HISα248(δN), HISα274(εN), bridging –OH, H2O |
hexacoordinate Ni2+ | LYSα219(CO2–), HISα136(εN), HISα138(εN), ASPα362(CO2–), bridging –OH, H2O |
flap α-helix 1 | α313−α322 GLU-HID-MET-ASP-MET-LEU-MET-VAL-CYS-HIE |
flap turn | α323−α329 HIP-LEU-ASP-LYS-SER-ILE-LYS |
flap α-helix 2 | α330−α336 GLU-ASP-VAL-GLN-PHE-ALA-ASP |
Flap residues refer to areas as outlined in the crystal structure. Numbering is according to Ha et al.13
HID, HIE, and HIP refer to histidines with protonated δ, ε and both imidazole nitrogens, respectively.