Table 2. Comparison of the transcriptomic libraries for the assembling of A. laevigata mitochondrial genome.
Gene | Illumina Library | Sanger Library | ||
Reads | bp* | Reads | bp | |
trn VMIQ | 15,573 | 667 | 0 | 0 |
NAD2 | 19,993 | 555 | 0 | 0 |
trn WCY | 675 | 164 | 0 | 0 |
COI | 692,055 | 657–117–150–368 | 123 | 1,436 |
COII | 179,406 | 447 | 30 | 643 |
COII-trn KD | 68,731 | 693 | 0 | 0 |
ATP8-6 | 121,623 | 239–155 | 47 | 966 |
ATP8-6-COIII | 162,863 | 409 | 0 | 0 |
COIII | 236,772 | 185–114–315 | 43 | 722 |
NAD3 | 12,569 | 162 | 0 | 0 |
NAD3-trn ARNSEF | 7,614 | 321 | 0 | 0 |
trn ARNSEF | 617 | 159 | 0 | 0 |
NAD5 | 225,379 | 1,552 | 9 | 1,449 |
NAD4 | 371,624 | 1,302 | 11 | 826 |
NAD4L | 2,603 | 368 | 0 | 0 |
NAD6 | 18,327 | 415 | 0 | 0 |
NAD6-Cytb | 47,000 | 439 | 0 | 0 |
Cytb | 97,794 | 289–108 | 21 | 970 |
Cytb-trnS | 136,312 | 935 | 0 | 0 |
NAD1 | 290,019 | 999 | 6 | 1,365 |
trnL-lrRNA | 8,217 | 329 | 0 | 0 |
lrRNA | 292,532 | 861 | 0 | 0 |
lrRNA-srRNA | 18,127 | 1,036 | 0 | 0 |
srRNA | 2,955 | 274 | 0 | 0 |
Total | 3,029,380 | 14,784 | 290 | 8,377 |
*Number of base pairs for each contig. Sizes of non-overlapping contigs for a given gene are separated by a dash.