Table 1. Highly diverse CDR3 regions in populations of T cells derived in vitro from hiPSC.
Vβ | (D) region | Jβ | Vβ | Jβ |
CTCGGCCGTGTATCTCTGTGCCAGCAGC | ACAGGG | TACAATGAGCAGTTCTTCGGGCCAGGGACAC | V11-2 | J2-1 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCT | ACA | CCTACAATGGGCAGTTCTTCGGGCCAGGGACAC | V11-2 | J2-1 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTTAGA | GG | ATGAAAAACTGTTTTTTGGCAGTGGAACCCAG | V11-2 | J1-4 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTTA | CAGGGGGCG | GAAAAACTGTTTTTTGGCAGTGGAACCCAG | V11-2 | J1-4 |
CTCGGCCGTGTATCTCTGTGCCAGCAGC | CAGGG | TGAAAAACTGTTTTTTGGCAGTGGAACCCAG | V11-2 | J1-4 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTT | CCA | TAATGAAAAACTGTTTTTTGGCAGTGGAACCCAG | V11-2 | J1-4 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCT | * | CCTACGAGCAGTACTTCGGGCCGGGCACCAGG | V11-2 | J2-7 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTTAG | GG | TACGAGCAGTACTTCGGGCCGGGCACCAGG | V11-2 | J2-7 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTTAGACA | GGGG | AGAGACCCAGTACTTCGGGCCAGGCACGCG | V11-2 | J2-5 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCT | GGACAGG | AGAGACCCAGTACTTCGGGCCAGGCACGCG | V11-2 | J2-5 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCT | ACAGGG | AAGAGACCCAGTACTTCGGGCCAGGCACGCG | V11-2 | J2-5 |
CTCGGCCGTGTATCTCTGTGCCAGCAGCTTA | CAGGGGGCG | AACTATGGCTACACCTTCGGTTCGGGGACCAGGT | V11-2 | J1-2 |
TTGGGGACTCGGCCATGTATCTCTGTGCCAGCAGC | CAGGG | TGAAAAACTGTTTTTTGGCAGTGGAACCCAG | V11-1 | J1-4 |
GGACTCGGCCGTGTATCTCTGTGCCAGCAGCTTA | ACTAGCGGGGGGGC | CACAGATACGCAGTATTTTGGCCCAGGCACCCGGC | V7-2 | J2-3 |
GGACTCGGCCGTGTATCTCTGTGCCAGCAGCTTAG | GACAGGG | CTATGGCTACACCTTCGGTTCGGGGACCAGGT | V7-2 | J1-2 |
AGATTCGGCAGCTTATTTCTGTGCCAGCTCACCAC | AGG | ACTATGGCTACACCTTCGGTTCGGGGACCAGGT | V18 | J1-2 |
CACATACCTCTCAGTACCTCTGTGCCAGCAGTGAA | CAGGGGG | ACACTGAAGCTTTCTTTGGACAAGGCACCAGA | V25-1 | J1-1 |
CACATACCTCTCAGTACCTCTGTGCCAGCAGTGA | CAACA | TGAACACTGAAGCTTTCTTTGGACAAGGCACCAGA | V25-1 | J1-1 |
GGAGGACTCAGCCATGTACTTCTGTGCCAGCAGTG | G | GAACACTGAAGCTTTCTTTGGACAAGGCACCAGA | V2 | J1-1 |
GACAGCTTTCTATCTCTGTGCCAGTAGTATAGACA | * | GCTCCTACAATGAGCAGTTCTTCGGGCCAGGGACAC | V19 | J2-1 |
Sequences of 20 TCR-β cDNA clones. Productive rearrangements were detected for 20 of 22 randomly selected clones.
Sequences between Vβ and Jβ were designated D regions. *Clones in which no Vβ and Jβ sequences were detected around the V(D)J junction region.