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Comparison between m-HMM and SegSeq in simulation study 1
| m-HMM | SegSeq | ||
|---|---|---|---|
| Gain |
Sensitivity |
0.917 |
0.000 |
| EFNR |
0.097 |
0.000 |
|
| Normal |
Specificity |
0.996 |
0.998 |
| EFPR |
0.002 |
0.019 |
|
| Loss or absent | Sensitivity |
0.898 |
0.076 |
| EFNR | 0.223 | 0.678 |
Sensitivities and empirical false negatives rates for copy number gain, loss and absent states, as well as d positive rates for the normal state in the first simulation study.
