Table 3.
QTL | Gene symbol | SNP |
|||||
---|---|---|---|---|---|---|---|
rs ID | Location (Mb)a | AA change | Major allele | Minor allele | P | ||
Hsnl1 | Cyp2j11 | 28105291 | 95.961592 | I 476 V | T, 21.6 ± 1.8a | C, 7.7 ± 2.6a | 0.0005 |
Cyp2j6 | 28120055 | 96.202243 | C 192 F | C, 21.6 ± 1.8a | A, 7.7 ± 2.6a | 0.0005 | |
Cyp2j9 | 28119885 | 96.252622 | I 90 V | T, 22.1 ± 1.8a | C, 7.6 ± 2.0a | 0.0003 | |
28119867 | 96.257924 | R 37 L | C, 21.8 ± 1.8a | A, 6.0 ± 1.6a | 0.0003 | ||
Cyp2j5 | 28119831 | 96.300844 | P 394 T | C, 21.8 ± 1.8a | A, 6.1 ± 1.6a | 0.0003 | |
Hsnl2 | Mgmt | 33644808 | 144.143061 | L 32 F | G, 22.1 ± 1.8a | T, 7.6 ± 2.0a | <0.0001 |
33669425 | 144.277666 | G 53 C | G, 24.8 ± 2.6a | T, 14.1 ± 1.5a | 0.0030 | ||
Hsnl4 | Chrm2 | 30378838 | 36.474006 | P 265 L | C, 9.4 ± 0.9b | T, 4.0 ± 0.6b | <0.0001 |
Candidate susceptibility genes are indicated according to QTL. Locations are from build 37. All SNPs resulting in an amino acid (AA) change are listed for each gene. Phenotypic means ± se for the respective QTL phenotype for strains having the major or minor allele are reported; P values indicate significant differences between allelic groups.
Macrophages ×103.
Percentage PMNs.