Table 3.
Comparison of predicted target genes participating in regulating metabolic processes between miR-1- miR-71-miR-7-miR-7-5p and bantam
| Metabolic processes in KEGG | Detected genes participating in the process | Rate of predicted target genes of miR-1,miR-71,miR-7 and miR-7-5p | Rate of predicted target genes of bantam |
|---|---|---|---|
| Proteasome |
15 |
8(53%) |
2 (13%) |
| Porphyrin metabolism |
10 |
4 (40%) |
3 (30%) |
| Ribosome |
49 |
15 (31%) |
1 (2%) |
| DNA replication |
15 |
4 (27%) |
3 (20%) |
| Oxidative phosphorylation |
39 |
10 (26%) |
11 (28%) |
| Pyrimidine metabolism |
24 |
6 (25%) |
11 (46%) |
| Phagosome |
49 |
9 (18%) |
26 (53%) |
| Folate biosynthesis |
6 |
1 (17%) |
3 (50%) |
| Purine metabolism |
38 |
6 (16%) |
20 (53%) |
| Protein processing in endoplasmic reticulum |
68 |
9 (13%) |
32 (47%) |
| Oocyte meiosis |
32 |
4 (12%) |
17 (53%) |
| Neurotrophin signaling pathway |
25 |
3 (12%) |
14 (56%) |
| Ubiquitin mediated proteolysis |
54 |
6 (11%) |
27 (50%) |
| RNA transport |
62 |
6 (10%) |
33 (53%) |
| Peroxisome |
11 |
1 (9%) |
4 (36%) |
| RNA degradation |
35 |
3 (8%) |
22 (63%) |
| mRNA surveillance pathway |
35 |
3 (8%) |
19 (54%) |
| Axon guidance |
36 |
3 (8%) |
25 (69%) |
| Basal transcription factors |
15 |
1 (7%) |
11 (73%) |
| Apoptosis |
15 |
1 (7%) |
9 (60%) |
| Glycerophospholipid metabolism |
22 |
1 (5%) |
12 (55%) |
| Insulin signaling pathway |
50 |
2 (4%) |
33 (66%) |
| Lysosome |
61 |
2 (3%) |
37 (61%) |
| Regulation of actin cytoskeleton |
98 |
3 (3%) |
57 (58%) |
| Endocytosis |
68 |
2 (3%) |
39 (57%) |
| Citrate cycle (TCA cycle) |
13 |
0 (0%) |
8 (62%) |
| Gastric acid secretion |
19 |
0 (0%) |
11 (58%) |
| Glycolysis/Gluconeogenesis |
23 |
0 (0%) |
11 (48%) |
| Protein digestion and absorption |
21 |
0 (0%) |
13 (62%) |
| Aminoacyl-tRNA biosynthesis |
17 |
0 (0%) |
10 (59%) |
| Fatty acid biosynthesis |
3 |
0 (0%) |
2 (67%) |
| pentose phosphate pathway | 9 | 0 (0%) | 6 (67%) |