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. 2014 Apr 7;10:86. doi: 10.1186/1746-6148-10-86

Table 1.

Primer sequences used for real-time RT-qPCR

Gene Genebank ID Amplicon size Forward sequence (primer #) Reverse sequence (primer #) Efficiency (qPCR)
Hipox
NM_001032376
142 bp
GCAGCCCCAGCGTCGTGATT
CGAGCAAGCCGTTCAGTCCTGT
99
Ppia
NM_214353
133 bp
TGCAGACAAAGTTCCAAAGACAG
GCCACCAGTGCCATTATGG
97
Ccl5
NM_001129946
78 bp
GAAATGGGTGCGGGAGTACA
GTTTGCACGAGTTCAGGCTC
94
Cox2
NM_214321
165 bp
TAGGATTCAGGGCTTTCACTGGCT
TGTCAGCCGACAATGAGATGTGGA
105
Ifnβ
NM_001003923
150 bp
TGCAACCACCACAATTCCAGAAGG
TCTGCCCATCAAGTTCCACAAGGA
102
Il1a
NM_214029
152 bp
TGAAGATGGCCAAAGTCCCTGACCT
ATCCATGCCGTCCCCAGGAAGTG
93
Il6
NM_214399
105 bp
ACTCCCTCTCCACAAGCGCCTT
TGGCATCTTCTTCCAGGCGTCCC
97
Il8
NM_213867
80 bp
TGTGAGGCTGCAGTTCTGGCAAG
GGGTGGAAAGGTGTGGAATGCGT
95
Il12a
NM_213993
162 bp
CTGAAGGCCGTCAGCAACAC
AGCCAGGCAACTCTCATTCG
92
Ifnλ1
NM_001142837
135 bp
TGGCCTTAGAGGCTGAGCTA
CCCTGATGCAAGCCTGAAGT
91
Irf1
NM_001097413
113 bp
AATCCAGCCCTGATACCTTCTCT
GGCCTGTTCAATGTCCAAGTC
95
Irf7
NM_001097428
94 bp
CTGCGATGGCTGGATGAA
TAAAGATGCGCGAGTCGGA
90
Plau
NM_213945
143 bp
CTCCAAAGGCAGCCATGAAC
CACAGTGCTCCCCTTGGAAT
106
Tnf
NM_214022
112 bp
GCCACCACGCTCTTCTGCCTA
ACGATGATCTGAGTCCTTGGGCCA
91
Vcam1 NM_213891 126 bp TCCACGCTGGTCATGAATCC TGGGTCCTTGGGGAAAGAGTA 101