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. 2014 Mar 13;15(1):191. doi: 10.1186/1471-2164-15-191

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© Zhao et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Comparison of gene expression patterns between mycelium and conidia on the chromosomes of Fusarium graminearum . (A) Each chromosome was divided into 20 kb windows. Log2-transformed read coverage per window was used to quantify gene expression levels in mycelium of F. graminearum. (B) Similarly, the Log2-transformed read coverage per window was used to quantify gene expression levels in conidia of F. graminearum. (C) The ratio of the log2-transformed RPKM values per window between mycelium and conidia. (D) The locations of the 300 genes that show the strongest up-regulation comparing mycelium to conidia (red lines) and the 300 genes that show the strongest down-regulated (blue lines) on each chromosome of F. graminearum. Green boxes represent non-conserved regions in F. graminearum.