Table 3. Summary of observed and estimated nucleotide variation at EC1.
Model | Population |
Observed data ( × 10−3) |
ML estimate ( × 10−3) |
ABC estimatea
( × 10−3) |
---|---|---|---|---|
θW/bp (95% CI) | θM/bp (95% CI) | πABC/bp (95% CI) | ||
1 | EC1 | 3.08 (2.01–4.15) | 13.18 (8.15–18.21) | |
2 | NFS | 3.31 (2.01–4.61) | 2.65 (1.60–3.71) | |
SFS | 2.28 (1.21–3.35) | 2.22 (1.72–2.72) | ||
3 | Pop. 1 | 2.03 (1.02–3.04) | 1.63 (1.05–2.21) | 2.1 (0–4.3) |
Pop. 2 | 2.84 (1.38–4.30) | 1.45 (0.09–1.97) | 2.5 (0.8–3.3) | |
Pop. 3 | 1.54 (0.58–2.49) | 1.39 (1.07–1.70) | 1.8 (0–1.4) |
Abbreviations: ABC, approximate Bayesian computation; CI, confidence interval; EC1, Evolution Canyon 1; ML, maximum-likelihood; NFS, North-facing slope; SFS, South-facing slope.
Mean values from 34 gene fragments for three different population models based on ML or ABC estimation.
On the basis of the coalescent simulation with the best Model 3.