Table 1.
The identified VvbZIP genes and their related information
| Gene name | Gene ID | Group | Chr. | Locus | Chain | Protein Length | Amount of intron | Intron pattern within bZIP domian | AtbZIP Ortholog (Syntenic orthologs were denoted by overstriking and italics) | |
|---|---|---|---|---|---|---|---|---|---|---|
|
VvbZIP01 |
VIT_01s0011g03230 |
J |
1 |
2941266 |
2946275 |
+ |
453 |
10 |
b |
46, 20, 45, 26, 65, 21, 57, 47, 22, 50 |
|
VvbZIP02 |
VIT_01s0010g00930 |
C |
1 |
16444033 |
16444682 |
- |
195 |
0 |
h |
42, 58, 48, 43, 3, 8, 70, 2, 44, 53, 7, 11, 41, 5, 68, 6, 16, 4 |
|
VvbZIP03 |
VIT_02s0025g01020 |
D |
2 |
989255 |
996186 |
+ |
398 |
10 |
a |
55(GBF3), 54(GBF2), 16, 68, 41 |
|
VvbZIP04 |
VIT_02s0012g02250 |
D |
2 |
9137736 |
9153313 |
- |
413 |
11 |
a |
55, 54, 16, 68, 41, 44, 42, 43, 58, 3, 70, 8, 48 |
|
VvbZIP05 |
VIT_03s0038g00860 |
F |
3 |
689247 |
693308 |
+ |
676 |
5 |
c |
29,30, 18, 52, 69, 51, 59, 31, 33, 61, 34, 74 |
|
VvbZIP06 |
VIT_03s0038g02420 |
I |
3 |
1679507 |
1683223 |
+ |
271 |
1 |
h |
23, 19, 24 |
|
VvbZIP07 |
VIT_03s0038g04450 |
C |
3 |
3227416 |
3228660 |
- |
157 |
0 |
h |
44, 11, 2, 53, 48, 3, 42, 43, 58, 8, 1, 6, 7, 5, 68, 70 |
|
VvbZIP08 |
VIT_03s0063g00310 |
A |
3 |
3887073 |
3890514 |
- |
409 |
4 |
a |
37(ABF3), 36, 38(ABF4/AREB2), 35(ABF1), 15, 66, 12, 67, 39, 14, 13, 40 |
|
VvbZIP09 |
VIT_04s0008g02750 |
B |
4 |
2284121 |
2287115 |
- |
349 |
5 |
d |
9, 63, 10, 2, 53, 42, 25, 44, 58, 3, 48, 68, 11 |
|
VvbZIP10 |
VIT_04s0008g05210 |
G |
4 |
4716191 |
4719252 |
+ |
169 |
3 |
f |
56(HY5), 64 |
|
VvbZIP11 |
VIT_04s0069g01150 |
A |
4 |
9841491 |
9842587 |
+ |
57 |
1 |
a |
66, 12, 37, 36, 35, 38, 39 |
|
VvbZIP12 |
VIT_04s0023g01360 |
D |
4 |
17832626 |
17863952 |
+ |
364 |
10 |
a |
41, 16, 68, 55, 54, 42, 70, 3, 58, 43, 48, 8, 44, 18 |
|
VvbZIP13 |
VIT_04s0023g02430 |
C |
4 |
18983616 |
18984767 |
+ |
249 |
0 |
h |
44, 11, 2, 53, 48, 42, 58, 3, 43, 8, 7, 6, 1, 5 |
|
VvbZIP14 |
VIT_05s0077g01140 |
C |
5 |
878161 |
879142 |
- |
154 |
0 |
h |
53, 2, 44, 11, 58, 3, 5, 48, 7, 1 |
|
VvbZIP15 |
VIT_05s0020g01090 |
G |
5 |
2860048 |
2863747 |
+ |
210 |
3 |
h |
64(HYH), 56 |
|
VvbZIP16 |
VIT_05s0102g01120 |
F |
5 |
23226450 |
23231749 |
- |
425 |
3 |
c |
69, 59, 18, 52, 51, 29, 30, 61, 33, 31, 34, 74 |
|
VvbZIP17 |
VIT_06s0004g08070 |
F |
6 |
8835674 |
8841051 |
- |
342 |
3 |
c |
18,52, 59, 69, 51, 29, 30, 33, 61, 31, 74, 34 |
|
VvbZIP18 |
VIT_06s0009g01790 |
A |
6 |
13809459 |
13815625 |
- |
248 |
2 |
a |
66, 12, 35, 38, 36, 67, 39, 40, 14, 13, 37, 15 |
|
VvbZIP19 |
VIT_06s0080g00340 |
A |
6 |
20262007 |
20263157 |
+ |
324 |
2 |
a |
67(DPBF2), 39, 66, 12, 35, 36, 38, 15, 37, 40 |
|
VvbZIP20 |
VIT_06s0080g00360 |
J |
6 |
20304714 |
20311349 |
- |
500 |
10 |
g |
21, 65, 45, 20, 26, 46, 22, 50, 47, 57 |
|
VvbZIP21 |
VIT_07s0141g00170 |
B |
7 |
116657 |
126811 |
- |
452 |
5 |
d |
25, 10, 63, 9 |
|
VvbZIP22 |
VIT_07s0005g01450 |
C |
7 |
3987031 |
3988120 |
+ |
145 |
0 |
h |
53, 44, 2, 11, 42, 3, 6, 48, 7, 58, 43, 8, 16, 1, 68 |
|
VvbZIP23 |
VIT_07s0031g01320 |
J |
7 |
17404970 |
17410595 |
+ |
349 |
7 |
b |
47, 57, 50. 22, 20, 45, 26, 21, 46, 65 |
|
VvbZIP24 |
VIT_08s0040g00870 |
H |
8 |
11857207 |
11860728 |
- |
819 |
1 |
h |
17, 28, 49 |
|
VvbZIP25 |
VIT_08s0007g03420 |
A |
8 |
17372100 |
17378057 |
- |
400 |
0 |
a |
39(ABI5), 35, 67, 66, 38, 37, 36, 12, 13, 15, 40, 14 |
|
VvbZIP26 |
VIT_08s0007g03640 |
UC |
8 |
17579864 |
17586189 |
+ |
496 |
5 |
a |
62 |
|
VvbZIP27 |
VIT_08s0007g05170 |
J |
8 |
19088004 |
19098613 |
- |
451 |
10 |
b |
45, 20, 26, 46, 21, 65, 57, 50, 22, 47 |
|
VvbZIP28 |
VIT_08s0007g06160 |
J |
8 |
19963578 |
19968190 |
- |
491 |
10 |
b |
65, 21, 45, 20, 26, 46, 22, 57, 50, 47 |
|
VvbZIP29 |
VIT_12s0028g02590 |
E |
12 |
3366293 |
3367561 |
- |
295 |
3 |
e |
61, 34, 51, 69, 18, 52, 59, 30, 29, 72, 33, 31 |
|
VvbZIP30 |
VIT_12s0055g00420 |
A |
12 |
13276799 |
13300251 |
+ |
299 |
3 |
a |
13, 40, 12, 66, 67, 35, 37, 38, 36, 39, 14 |
|
VvbZIP31 |
VIT_12s0034g00110 |
A |
12 |
15485471 |
15491224 |
+ |
99 |
3 |
a |
66, 12, 37, 36, 35, 38, 39 |
|
VvbZIP32 |
VIT_12s0035g00620 |
E |
12 |
20038502 |
20045379 |
+ |
374 |
3 |
e |
61, 34, 69, 59, 18, 51, 29, 52, 30 |
|
VvbZIP33 |
VIT_13s0067g02900 |
F |
13 |
1562503 |
1569804 |
+ |
359 |
3 |
c |
18, 52, 59, 69, 51, 29, 30, 33, 61, 31, 34, 74, 72 |
|
VvbZIP34 |
VIT_13s0175g00120 |
A |
13 |
15049338 |
15072969 |
+ |
325 |
2 |
a |
66, 12, 35, 67, 38, 37, 36, 39, 15, 14 |
|
VvbZIP35 |
VIT_13s0084g00660 |
J |
13 |
19780668 |
19805654 |
- |
469 |
10 |
b |
45, 26, 20, 46, 21, 65, 57, 22, 50, 47 |
|
VvbZIP36 |
VIT_13s0158g00380 |
I |
13 |
21283084 |
21284766 |
- |
286 |
1 |
h |
23, 19, 24 |
|
VvbZIP37 |
VIT_14s0060g01210 |
C |
14 |
959578 |
961198 |
- |
145 |
0 |
h |
53, 11, 2, 44, 1, 48, 58, 3, 8, 7, 42, 43, 70 |
|
VvbZIP38 |
VIT_14s0030g02200 |
B |
14 |
7402807 |
7408597 |
+ |
423 |
5 |
d |
63. 10. 25. 9 |
|
VvbZIP39 |
VIT_14s0083g00700 |
C |
14 |
22839619 |
22840360 |
- |
198 |
0 |
h |
42,43, 58, 3,48, 8, 70, 44, 2, 53, 6, 11, 41, 7, 5, 68 |
|
VvbZIP40 |
VIT_15s0046g01440 |
D |
15 |
18416554 |
18423462 |
- |
430 |
11 |
a |
55(GBF3), 54(GBF2), 16, 68, 41, 3, 42, 43, 70, 58 |
|
VvbZIP41 |
VIT_18s0122g00500 |
UC |
18 |
420616 |
423564 |
+ |
322 |
2 |
f |
60
|
|
VvbZIP42 |
VIT_18s0001g04470 |
J |
18 |
3861987 |
3867762 |
- |
363 |
7 |
b |
57, 47, 50, 22, 26, 20, 65, 45, 21, 46 |
|
VvbZIP43 |
VIT_18s0001g04500 |
A |
18 |
3875315 |
3878509 |
+ |
311 |
2 |
a |
12, 66, 35, 36, 39, 38, 37, 14, 15, 67, 40, 13 |
|
VvbZIP44 |
VIT_18s0001g08710 |
C |
18 |
7185268 |
7185664 |
- |
81 |
0 |
h |
7, 6, 4, 5, 2, 3 |
|
VvbZIP45 |
VIT_18s0001g10450 |
A |
18 |
8761978 |
8769742 |
- |
447 |
3 |
a |
36(ABF2/AREB1), 35, 37(ABF3), 38, 66, 12, 39, 15, 67 |
|
VvbZIP46 |
VIT_18s0001g12120 |
D |
18 |
10309606 |
10313842 |
+ |
396 |
10 |
a |
41, 16, 68, 55, 54, 43, 58, 42, 3, 48, 70, 8 |
|
VvbZIP47 |
VIT_18s0001g13040 |
C |
18 |
11138196 |
11139020 |
+ |
154 |
0 |
h |
44, 11, 2, 53, 48, 3, 42, 58, 43, 1, 7, 6, 8, 5 |
|
VvbZIP48 |
VIT_18s0001g13740 |
F |
18 |
11745490 |
11746413 |
- |
187 |
3 |
c |
30, 29, 51, 69, 52, 18, 59, 33, 31, 61, 34 |
|
VvbZIP49 |
VIT_18s0001g14890 |
A |
18 |
12936974 |
12937903 |
- |
214 |
2 |
a |
14(FD), 66, 12, 37, 36, 39, 38, 35, 27 |
|
VvbZIP50 |
VIT_18s0076g00330 |
F |
18 |
16209694 |
16218061 |
+ |
350 |
3 |
c |
51, 18, 69, 59, 52, 29, 30, 31, 61, 33, 74, 34 |
|
VvbZIP51 |
VIT_18s0072g00470 |
A |
18 |
19680318 |
19687522 |
+ |
275 |
3 |
a |
13, 40, 66, 12, 39, 36 |
|
VvbZIP52 |
VIT_19s0014g01780 |
E |
19 |
1945207 |
1947498 |
- |
309 |
3 |
e |
61, 34, 51, 18, 52, 69, 59, 30, 29, 72, 33, 31 |
|
VvbZIP53 |
VIT_19s0015g01020 |
A |
19 |
9101591 |
9112651 |
- |
251 |
2 |
g |
36, 12 |
|
VvbZIP54 |
VIT_18s0001g03010 |
E |
18_random |
3068050 |
3070292 |
- |
272 |
3 |
e |
61, 34, 69, 51, 59 |
| VvbZIP55 | VIT_00s0541g00020 | C | Un | 31593865 | 31594595 | - | 194 | 0 | h | 6, 5, 7, 44, 42, 58, 2, 3, 11, 48, 53, 43, 70, 8, 1, 4 |
Note: AtbZIP Orthologs were identified by local BLAST search with E-value < 1E-10 and the identification of syntenic orthologs (highlight with italics) was performed by using the software MCScanX.