Table 8.
INDELs in putative acyl lipid genes
| Soybean line | Jack | FAM94-41 | M23 | N0304-303-3 | R02-6268 F | R05-4256 | R05-591 | R08-1450 | R95-1705 | Total | Average |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Total INDEL count in annotated genes |
16 |
22 |
18 |
21 |
20 |
13 |
10 |
24 |
20 |
45 |
18.22 |
| INDELs in annotated exons |
10 |
18 |
14 |
15 |
17 |
11 |
9 |
20 |
14 |
32 |
14.22 |
| INDELs in annotated UTRs |
7 |
16 |
12 |
13 |
15 |
9 |
8 |
18 |
13 |
28 |
12.33 |
| INDELs in annotated CDS |
3 |
2 |
2 |
2 |
2 |
2 |
1 |
2 |
1 |
4 |
1.89 |
| INDELs in termination codons |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0.00 |
| INDELs in splice sites |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0.00 |
| INDELs in annotated introns |
7 |
6 |
5 |
7 |
4 |
3 |
2 |
5 |
7 |
13 |
5.11 |
| Homozygous INDELs |
14 |
21 |
15 |
19 |
18 |
11 |
7 |
18 |
18 |
43 |
15.67 |
| Heterozygous INDELs |
2 |
1 |
3 |
2 |
2 |
2 |
3 |
6 |
2 |
16 |
2.56 |
| INDELs overlapping with dbSNP | 5 | 2 | 6 | 5 | 2 | 3 | 1 | 4 | 6 | 10 | 3.78 |