Skip to main content
. Author manuscript; available in PMC: 2014 Oct 3.
Published in final edited form as: J Am Chem Soc. 2013 Sep 20;135(39):14741–14753. doi: 10.1021/ja405939x

Table 1.

Absolute binding free energy (ΔGb()) of Gleevec with Abl, c-Kit, Lck, and c-Src tyrosine kinases.a The conformation of the A-loop in c-Src is open-form (o) or closed-form conformation (c).

site
ΔΔGrepbulksite
ΔΔGdisbulksite
ΔΔGelecbulksite
ΔΔGintbulksite
ΔΔGt+rbulksite
ΔΔGcbulksite
ΔGb()
expt. b
Abl 1.2 −29.4 0.5 −27.7 5.6 11.3 −10.8 −10.8
c-Kit 7.0 −28.3 −4.7 −26.0 4.8 12.2 −9.0
Lck 0.4 −25.3 0.0 −24.9 5.2 12.4 −7.3 −8.7
c-Src(c) 0.0 −25.1 0.9 −24.2 6.3 13.3 −4.6 −6.2
c-Src(o) 4.0 −23.0 0.1 −18.9 4.6 7.5 −6.8
a

Unit in kcal/mol.

b

The values were derived from the experimentally measured inhibitory potency of Gleevec for unphosphorylated Abl, Lck, and c-Src kinase domain, which is 0.013, 0.43, and 31.1 µM, respectively.14