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. 2014 May 10;15:138. doi: 10.1186/1471-2105-15-138

Table 1.

Optional arguments of begin.rctrack

Argument Value Action
rng.init
a list with components
specifies how random number generation
 
seed, kind, and normal.kind
will be initialized by set.seed
details.file
name of Rdata file to store details
end.rctrack will save details to this file
archive.folder
character string name of
end.rctrack will create a directory
 
the archive directory
with name defined by appending a time
 
 
stamp to archive.folder
maxsize.archive
a numeric with file size in bytes
end.rctrack will NOT copy INPUT
 
 
files larger than this size to
 
 
the archive directory
do.not.archive
a vector of character strings
files with extensions matching these strings
 
 
will NOT be moved to the archive directory
skip.file.calls
a vector of character strings
a list of high-level file access statements
 
with function names
for which details will NOT be collected
skip.empty.description
a logical (TRUE/FALSE) that
if TRUE, then no details about file
 
indicates whether to skip detail
access events with empty descriptions
 
collection for empty file descriptions
(no file name) will be collected
rng.trace
a logical that indicates
if TRUE, begin.rctrack will
 
whether to collect details
embed rctrack.random into each of the
 
about every random number
functions listed in the rng.functions
 
generation event
argument so that a record of every call
 
 
to those functions is retained.
rng.functions
a vector of character strings with
begin.rctrack will embed
 
the names of functions that
rctrack.random into each of these
 
generate random numbers
functions so that their use
 
 
is documented in rc.env and
 
 
details.file
print.trace
a logical that indicates
Messages will be issued if TRUE
 
whether to print messages about
 
  detail tracking