Table 3. Number of reads generated from the RNA-Seq analysis and the corresponding gene expression range obtained for resistant Kaleso and susceptible Albert cassava varieties.

	Albert healthy	Albert CBSV	Kaleso healthy	Kaleso CBSV
All reads	54,045,667	60,070,579	38,949,010	49,681,907
Mapped to whole genome	31,632,660	35,964,664	20,946,755	29,534,087
Number of genes with:
RPKM>1000	105	102	102	67
RPKM>100	2,150	2,246	2,225	2,337
RPKM>10	12,656	12,628	13,268	13,801
RPKM>1	20,185	20,071	20,686	21,224