Table 1. F. virguliforme peptides identified from the xylem sap of F. virguliforme-infected soybean plants.
Protein IDa | Description | Protein score | Protein mass (kDa) | # of peptides | Times identifiedb | emPAIc | Signal peptide |
g3913 | Cerato-platanin | 6146 | 15.2 | 2 | 3(422) | 1.2 | Y |
g12110 | PAN_1 PAN domain | 1008 | 28.2 | 2 | 2(72) | 0.1 | Y |
g8948 | Unknown | 943 | 20.9 | 2 | 1(19) | 0.6 | Y |
g11360 | Unknown | 687 | 25 | 2 | 2(45) | 0.3 | Y |
g10227 | Lipoprotein_15 Secreted repeat of unknown function | 199 | 23.1 | 2 | 2(11) | 1 | Y |
Protein identification numbers are same as the gene IDs of the F. virguliforme genome database (http://fvgbrowse.agron.iastate.edu) [56].
Number of times the peptides were identified from five biological replicates of xylem saps collected from F. virguliforme-infected soybean plants. The total number of times a peptide(s) was identified is presented in parentheses.
Exponentially modified protein abundance index. This equals to 10PAI-1, which is proportional to the protein content in a protein mixture.